Prepares PTM data for N-to-C visualization by ensuring required columns
exist and standardizing column names.
Usage
prepare_ntoc_data(data, analysis_type = "dpa")
Arguments
- data
Data frame with PTM results
- analysis_type
Character. Analysis type: "dpa", "dpu", or "cf"
Value
Data frame prepared for N-to-C plotting functions
Details
The function handles different analysis types which may have different
column naming conventions:
DPA: Uses diff.site, FDR.site columns
DPU: Uses diff_diff, FDR_I columns
CF: Uses diff, FDR columns