compute IBAQ values

Description

compute IBAQ values

Usage

compute_IBAQ_values(
  lfqdata,
  protein_annotation,
  protein_length = "protein_length",
  nr_tryptic_peptides = "nr_tryptic_peptides"
)

Arguments

lfqdata	LFQData object
protein_annotation	ProteinAnnotation object
protein_length	column name for protein length
nr_tryptic_peptides	column name for number of tryptic peptides

Examples

library("prolfquapp")

pAlf <- sim_data_protAnnot()
xd <- compute_IBAQ_values(pAlf$lfqdata, pAlf$pannot)
xd$response()

[1] "IBAQValue"

pAlf <- sim_data_protAnnot(PROTEIN = TRUE)
xd <- compute_IBAQ_values(pAlf$lfqdata, pAlf$pannot)
xd$response()

[1] "IBAQValue"