read DiaNN diann-output.tsv file

Description

filter for 2 peptides per protein, and for Q.Value < 0.01 (default)

Usage

diann_read_output(data, Lib.PG.Q.Value = 0.01, PG.Q.Value = 0.05)

Arguments

data data frame of DIA-NN report
Lib.PG.Q.Value library protein group q-value threshold
PG.Q.Value protein group q-value threshold

Examples

library("prolfquapp")

xx <- readr::read_tsv("WU292720_report.tsv")
report2 <- prolfquapp::diann_read_output(xx)
nrow(report2)